Structure

Laboratory of Macromolecular Crystallography


Publications by E.A.Vernoslova

At 2003, January 01

The full texts of papers, preprints and theses may be found here.

Papers in journals

  • Urzhumtsev, A.G., Vernoslova, E.A. & Podjarny, A.D. (1996). "Approaches to Very Low Resolution Phasing of the Ribosome 50S particle from Thermus thermophilus by the Few-Atoms-Models and Molecular-Replacement Methods". Acta Cryst. D52,1092-1097.

  • Lunin, V.Yu., Lunina, N.L., Petrova, T.E., Vernoslova, E.A., Urzhumtsev, A.G. & Podjarny, A.D. (1995). "On the ab-initio Solution of the Phase Problem for Macromolecules at Very Low Resolution: the Few Atoms Model Method". Acta Cryst., D51, 896-903.

  • Navaza, J. & Vernoslova, E. (1995). "On the Fast Translation Functions for Molecular Replacement". Acta Cryst. A51, 445-449.

  • Vernoslova, E.A. & Lunin, V.Yu. (1993). "The FROG PC series: programs for electron-density and model investigation for proteins". J.Appl.Cryst., 26, 291-294.

  • Lunin, V.Yu. & Vernoslova, E.A. (1991). "Frequency-Restrained Structure Factor Refinement. II. Comparison of Methods". Acta Cryst. A47, 238-243.

  • Chirgadze, Yu.N., Nevskaya, N.A., Vernoslova, E.A., Nikonov, S.V., Sergeev, Yu.V., Brazhnikov, E.V., Fomenkova, N.P., Lunin, V.Yu. & Urzhumtsev, A.G. (1991). "Crystal structure of calf eye lens gamma-crystalline IIIb at 2.5A resolution: its relation to function". Experimental Eye Research, 53, 295-304.

  • Urzhumtsev, A.G., Lunin, V.Yu. & Vernoslova, E.A. (1989). "FROG - high-speed restraint-constraint refinement program for macromolecular structure". J.Appl.Cryst., 22, 500-506.

  • Chirgadze, Yu.N., Nevskaya, N.A., Fomenkova, N.P., Nikonov, S.V., Sergeev, Yu.V., Brazhnikov, E.V., Garber, M.B., Lunin, V.Yu., Urzhumtsev, A.G. & Vernoslova, E.A. (1986). "Spatial structure of gamma-crystalline IIIb from calf lens at 2.5A resolution". Dokl.Akad.Nauk SSSR, 290, 2, 492-495. (In Russian)

  • Lunin, V.Yu., Urzhumtsev, A.G., Vernoslova, E.A., Chirgadze, Yu.N., Nevskaya, N.A. & Fomenkova, N.P. (1985). "Phase Improvement in Protein Crystallography Using a Mixed Electron Density Model". Acta Cryst., A41, 166-171.

The full texts of papers

Papers in digest

  • Volkmann, N., Schlunzen, F., Urzhumtsev, A.G., Vernoslova, E.A., Podjarny, A.D., Roth, M., Pebay-Peyroula , E., Berkovitch-Yellin, Z., Zaytzev-Bashan, A. & Yonath, A. (1995). "On ab-initio phasing of ribosomal particles at very low resolution". Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography, 31, 23-32.

  • Lunin, V.Yu., Lunina, N.L., Petrova, T.E., Vernoslova, E.A., Urzhumtsev, A.G. & Podjarny, A.D. (1994). "On the ab-initio solution of the phase problem for macromolecules at very low resolution. The Few Atoms Model method". Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography, 30, 37-44.

  • Vernoslova, E.A. & Urzhumtsev, A.G. (1994). "Current development in the program package FROG for atomic model refinement". Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography, 30, 27-28.

  • Vernoslova, E. & Lunin, V. (1992). "FAN Scalar Field Analysis". Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography, 27, 35.

  • Vernoslova, E. (1992). "FFT Discrete Three-Dimensional Fourier transform". Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography, 27, 36.

  • Vernoslova, E & Lunin, V. (1992). "CAN Comparative Analysis of three-dimensional Functions". Joint CCP4 and ESF-EACBM Newsletter on Protein Crystallography, 27, 37.

  • Urzhumtsev, A.G., Lunin, V.Yu. & Vernoslova, E.A. (1990). "New refinement program FROG gives new possibilities to study macromolecular models". Proc.of the First Intern. Meeting on Structure and Chemistry of Ribonucleases, Moscow, USSR, December 1989, 410-415.

  • Urzhumtsev, A.G., Lunin, V.Yu. & Vernoslova, E.A. (1989). "The program complex FROG for local refinement of atomic structures of macromolecules". In Computing methods of protein engineering, Software, Institute of Mathematics AS BSSR & Institute of biochemistry, 86, 86-97, Minsk. (In Russian)

The full texts of papers

Preprints & Software

  • Urzhumtsev, A.G., Lunin, V.Yu. & Vernoslova, E.A. (1988). "Program package FROG". Software, FORTRAN, 10, NCBI AN SSSR, Pushchino, Russia. (In Russian)

  • Lunin, V.Yu., Urzhumtsev, A.G., Vernoslova, E.A., Chirgarze, Yu.N., Fomenkova, N.P. & Nevskaya, N.A. (1984). "Using of atomic mixed model for phase improvement in protein crystallography". Preprint, NCBI AN SSSR, Pushchino, Russia. (In Russian)

The full texts of papers

Theses

  • Vernoslova, E.A. (1996). "The development and the use of software for the protein crystallography purposes". Resume of Ph.D.Theses, ONTI PNC RAN, Pushchino, Russia. (In Russian)

  • Vernoslova, E.A. (1996). "The development and the use of software for the protein crystallography purposes". Ph.D.Theses, Institute of Crystallography RAS, Moscow, Russia. (In Russian)

The full texts of papers

Abstracts

  • Podjarny, A.D., Lunina, N., Urzhumtsev, A.G., Vernoslova, E.A., Petrova, T. & Lunin, V. (1998). "Ab-initio phasing at 30 A of the t50S ribosomal particle with the Few Atoms Model method". ACA Annual Meeting, Arlington, Virginia, July 18-23, 1998, 11.03.08, 74.

  • Podjarny, A.D., Urzhumtsev, A.G., Vernoslova, E.A., Petrova, T., Lunina, N. & Lunin V. (1998). "Recent advances on the application of the few atom model method to the T50S ribosomal particle". Association Francaise de Cristallographie, AFC98, Orleans, 24-27 fevrier 1998, BCG-A02.

  • Podjarny, A.D., Urzhumtsev, A.G. & Vernoslova, E.A. (1996). "Very low resolution phasing attempts of the ribosome 50S particle from T. thermophilus by the Few Atoms Model method". XVII Intern.Cryst.Congr., Seattle, USA, August 8-17, 1996, Coll.Abstr., C-67.

  • Urzhumtsev, A.G., Lunin, V.Yu., Vernoslova, E.A., Urzhumtseva, L.M. & Podjarny, A.D. (1995). "La methode FAM pour le phasage ab-initio: Applications". AFC95, 24-27 Jan. 1995, Grenoble, BL15.

  • Lunin, V.Yu., Urzhumtsev, A.G., Vernoslova, E.A., Lunina, N.L., Petrova, T.E. & Podjarny, A.D. (1995). "La methode FAM pour le phasage ab-initio: Theorie". AFC95, 24-27 Jan. 1995, Grenoble, P07a.

  • Lunin, V.Yu., Lunina, N.L., Petrova, T.E., Vernoslova, E.A., Urzhumtsev, A.G. & Podjarny, A.D. (1995). "On the ab-initio solution of the phase problem for macromolecules at very low resolution: the Few Atoms Models method". 4th European Workshop on Crystallography of Biological Macromolecules, Como (Italy), May 21-25, O19.

  • Urzhumtsev, A.G., Lunin, V.Yu., Vernoslova, E.A., Lunina, N.L., Petrova, T.E., Navaza, J. & Podjarny, A.D. (1994). "Very low resolution phasing with simple models". 15th Eur. Cryst. Meeting, Dresden, Germany, 28.8-2.9/1994, Coll.Abstr., R.Oldenbourg Verlag, Munchen, 217.

  • Lunin, V.Yu., Lunina, N.L., Petrova, T.E., Vernoslova, E.A., Urzhumtsev, A.G. & Podjarny, A.D. (1994). "A Monte Carlo Approach to low resolution phasing in protein crystallography". ACA Annual Meeting, June 25 - July 1, 1994, INFORUM, Atlanta, Georgia, Atlanta Convention Center, 178.

  • Chirgadze, Yu.N., Vernoslova, E.A., Nikonov, S.V., Sergeev, Yu.V., Brazhnikov, E.V., Fomenkova, N.P., Lunin, V.Yu. & Urzhumtsev, A.G. (1989). "Refined structure of calf lens ?-crystalline IIIb at 2.5A resolution". XIIth European Cryst. Meeting, Moscow, USSR, August 1989, Coll.Abstr., 2, 362.

  • Urzhumtsev, A.G., Lunin, V.Yu. & Vernoslova, E.A. (1989). "FROG - new refinement program". XIIth European Cryst. Meeting, Moscow, USSR, August 1989, Coll.Abstr., 3, 193. Chirgadze, Yu.N., Nevskaya, N.A., Urzhumtsev, A.G. & Vernoslova, E.A. (1989). "Structure refinement of "dry" form of calf lens γ-crystallin IIIb at 1.9A resolution". XIIth European Cryst. Meeting, Moscow, USSR, August 1989, Coll.Abstr., 2, 363.

  • Murzin A.G. & Vernoslova E.A. (1988). "Computer modelling of protein hybrids: phage T4 lysozime with a Ca2+ - binding module (FE-hand)". V conference of young scientist of socialist countries on Bioorganic Chemistry, Abstracts, Pushchino (USSR), 1988, 83-84.

The full texts of papers